PDBsum entry 4zqb

Pore analysis for: 4zqb calculated with

MOLE 2.0

PDB id

4zqb

Pores calculated on whole structure

Pores calculated excluding ligands

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4 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.49

1.87

30.4

-1.30

-0.27

19.7

81

4

1

1

5

1

1

0

SO4 404 B

2

2.41

2.44

31.5

-0.74

-0.09

15.8

75

5

1

0

6

2

2

0

NAP 401 B SO4 402 B

3

1.16

1.46

38.9

-1.51

-0.22

19.4

65

4

3

1

1

4

1

0

4

2.32

2.42

43.1

-0.64

0.05

13.1

75

4

3

2

5

3

2

0

NAP 401 B SO4 402 B

5

1.43

3.57

92.8

-1.50

-0.46

23.1

76

9

8

2

6

1

4

0

6

1.33

1.54

125.3

-0.91

-0.33

18.2

78

12

9

2

14

1

6

0

NAP 401 B SO4 402 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.