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PDBsum entry 4zph

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4zph calculated with MOLE 2.0 PDB id
4zph
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.78 33.0 0.09 -0.01 7.5 86 2 1 3 11 1 0 0  
2 1.58 2.18 33.5 -0.61 -0.15 19.5 89 4 3 2 7 0 0 0  
3 1.59 2.16 39.6 -1.06 -0.27 19.9 90 4 3 3 7 0 0 0  
4 1.59 2.16 40.6 -0.67 -0.20 17.9 87 4 3 2 6 0 1 0  
5 1.22 1.44 23.9 1.69 0.48 1.1 81 0 0 4 6 3 0 1  
6 1.13 1.21 35.5 2.21 0.72 0.9 87 0 0 3 9 3 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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