 |
PDBsum entry 4zk7
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4zk7 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4zk7
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
22 pores,
coloured by radius |
 |
22 pores,
coloured by radius
|
22 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.42 |
1.62 |
33.4 |
-1.21 |
-0.15 |
22.5 |
77 |
 |
6 |
2 |
2 |
4 |
2 |
1 |
0 |
 |
|
 |
 |
2 |
 |
3.55 |
3.79 |
51.1 |
-1.48 |
-0.62 |
17.9 |
80 |
4 |
9 |
4 |
2 |
0 |
6 |
0 |
|
 |
3 |
 |
3.78 |
3.83 |
55.9 |
-1.37 |
-0.63 |
16.4 |
77 |
2 |
9 |
4 |
2 |
0 |
7 |
0 |
|
 |
4 |
 |
1.33 |
1.55 |
62.0 |
-1.96 |
-0.28 |
28.3 |
75 |
9 |
3 |
2 |
5 |
2 |
3 |
0 |
|
 |
5 |
 |
1.52 |
1.74 |
75.2 |
-1.20 |
-0.39 |
17.9 |
80 |
8 |
9 |
5 |
6 |
2 |
4 |
0 |
|
 |
6 |
 |
1.56 |
1.77 |
79.0 |
-1.11 |
-0.43 |
17.2 |
81 |
8 |
8 |
5 |
6 |
2 |
5 |
0 |
|
 |
7 |
 |
3.57 |
3.65 |
84.1 |
-2.07 |
-0.84 |
26.1 |
81 |
2 |
22 |
4 |
2 |
0 |
8 |
0 |
|
 |
8 |
 |
3.57 |
3.82 |
84.2 |
-1.98 |
-0.81 |
24.3 |
81 |
2 |
22 |
4 |
2 |
0 |
9 |
0 |
|
 |
9 |
 |
3.57 |
3.77 |
86.6 |
-1.99 |
-0.81 |
24.8 |
81 |
4 |
22 |
4 |
2 |
0 |
8 |
0 |
|
 |
10 |
 |
3.60 |
3.69 |
86.9 |
-1.91 |
-0.79 |
23.6 |
80 |
0 |
23 |
4 |
2 |
0 |
10 |
0 |
|
 |
11 |
 |
3.66 |
3.74 |
88.0 |
-2.06 |
-0.82 |
26.4 |
81 |
2 |
22 |
4 |
2 |
0 |
8 |
0 |
|
 |
12 |
 |
3.52 |
3.68 |
88.2 |
-1.88 |
-0.75 |
23.9 |
80 |
2 |
23 |
4 |
2 |
0 |
10 |
0 |
|
 |
13 |
 |
3.75 |
3.89 |
88.2 |
-1.97 |
-0.79 |
24.6 |
81 |
2 |
22 |
4 |
2 |
0 |
8 |
0 |
|
 |
14 |
 |
3.52 |
3.68 |
88.6 |
-1.87 |
-0.74 |
23.5 |
80 |
2 |
21 |
4 |
2 |
0 |
10 |
0 |
|
 |
15 |
 |
3.54 |
3.70 |
89.7 |
-2.06 |
-0.79 |
27.1 |
81 |
4 |
23 |
4 |
2 |
0 |
8 |
0 |
|
 |
16 |
 |
3.60 |
3.70 |
89.3 |
-1.90 |
-0.79 |
23.8 |
81 |
2 |
23 |
4 |
2 |
0 |
9 |
0 |
|
 |
17 |
 |
3.52 |
3.68 |
91.0 |
-1.86 |
-0.74 |
23.7 |
81 |
4 |
21 |
4 |
2 |
0 |
9 |
0 |
|
 |
18 |
 |
3.83 |
4.01 |
90.6 |
-1.95 |
-0.79 |
24.7 |
81 |
4 |
22 |
4 |
2 |
0 |
8 |
0 |
|
 |
19 |
 |
1.44 |
1.69 |
108.2 |
-1.77 |
-0.60 |
23.7 |
82 |
8 |
20 |
5 |
6 |
2 |
7 |
0 |
|
 |
20 |
 |
1.21 |
1.18 |
110.2 |
-1.84 |
-0.66 |
24.7 |
82 |
7 |
22 |
5 |
6 |
2 |
6 |
0 |
|
 |
21 |
 |
1.53 |
1.79 |
112.4 |
-1.80 |
-0.66 |
24.6 |
81 |
6 |
22 |
5 |
6 |
2 |
7 |
0 |
|
 |
22 |
 |
1.62 |
1.80 |
114.1 |
-1.84 |
-0.65 |
25.5 |
81 |
8 |
22 |
5 |
6 |
2 |
8 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |