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PDBsum entry 4zk5

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4zk5 calculated with MOLE 2.0 PDB id
4zk5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.47 16.8 -0.55 -0.12 20.0 78 2 3 0 5 0 0 1  
2 1.32 1.50 17.5 -0.77 -0.20 20.8 76 2 3 0 4 0 0 1  
3 1.23 2.07 32.4 0.17 -0.03 11.5 76 2 1 1 5 0 1 1  
4 1.22 2.07 33.1 -0.19 -0.12 13.3 74 2 1 1 4 0 1 1  
5 1.40 1.49 16.1 0.99 0.45 1.4 76 0 0 1 4 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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