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PDBsum entry 4zk1

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Pore analysis for: 4zk1 calculated with MOLE 2.0 PDB id
4zk1
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.55 1.54 52.9 -1.30 -0.36 12.3 85 6 0 9 7 1 2 0  
2 2.05 2.41 54.4 -1.07 -0.60 13.6 95 4 7 8 2 0 0 0  
3 1.92 2.26 82.7 -1.96 -0.69 14.1 88 5 2 10 2 0 2 0  
4 1.91 2.25 86.1 -2.54 -0.80 14.2 88 9 2 19 1 0 1 0  
5 1.92 2.06 90.3 -1.94 -0.70 13.3 86 7 4 9 2 0 2 0  
6 1.94 2.33 94.6 -2.40 -0.79 14.3 89 11 4 20 1 0 1 0  
7 1.47 1.86 96.4 -1.67 -0.63 10.0 89 5 1 17 9 1 3 0  
8 1.44 1.86 101.0 -1.88 -0.70 8.5 89 6 0 21 8 1 3 0  
9 1.22 1.56 101.8 -1.12 -0.19 9.6 76 5 2 12 13 7 5 2  4P7 302 E
10 1.54 1.77 101.9 -2.25 -0.76 10.5 90 11 0 31 8 1 2 0  
11 1.80 1.89 109.3 -1.31 -0.56 17.5 87 5 12 9 4 2 0 0  
12 1.92 2.04 113.0 -2.09 -0.73 12.9 88 7 6 13 2 0 2 0  
13 1.45 1.85 119.7 -1.85 -0.67 9.9 90 7 2 23 9 1 3 0  
14 1.49 1.90 122.9 -1.72 -0.62 11.8 90 8 3 24 8 1 3 0  
15 1.31 1.28 128.2 -2.10 -0.48 25.0 85 13 10 12 8 2 2 0  
16 1.23 1.44 129.8 -1.62 -0.39 11.1 80 7 4 19 7 6 4 2  4P7 302 E
17 1.16 2.76 129.8 -1.09 -0.29 7.3 81 3 2 18 11 6 3 2  4P7 302 D
18 1.27 1.29 135.3 -1.71 -0.45 8.6 84 9 2 32 10 6 2 2  4P7 302 D
19 1.22 2.70 134.4 -1.39 -0.38 6.5 82 4 2 23 11 6 3 2  4P7 302 D
20 1.19 1.62 137.8 -0.85 -0.01 5.8 75 3 4 17 16 12 5 4  4P7 302 D 4P7 302 E
21 1.27 1.29 141.8 -1.15 -0.33 8.0 83 4 4 23 11 6 3 2  4P7 302 D
22 1.33 1.33 146.1 -2.67 -0.69 22.9 86 17 9 19 2 1 1 0  
23 1.29 1.32 149.2 -1.18 -0.38 8.0 83 5 6 22 11 6 3 2  4P7 302 D
24 1.27 1.28 153.1 -1.41 -0.40 7.9 83 5 4 24 11 6 3 2  4P7 302 D
25 1.34 1.34 157.8 -2.51 -0.63 25.3 87 17 12 19 2 1 1 0  
26 1.41 1.37 165.1 -2.41 -0.65 23.5 87 18 13 18 2 1 1 0  
27 1.23 2.73 165.9 -1.85 -0.30 20.5 81 13 12 18 11 7 2 2  4P7 302 D
28 1.56 1.63 196.0 -1.44 -0.60 9.3 88 8 4 27 10 3 3 1  
29 1.46 1.91 203.4 -1.40 -0.61 9.3 88 9 6 26 10 3 3 1  
30 1.23 2.73 205.2 -0.90 -0.27 5.8 82 6 4 26 20 9 4 3  4P7 302 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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