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PDBsum entry 4zjo

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4zjo calculated with MOLE 2.0 PDB id
4zjo
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.32 47.4 -0.92 -0.40 14.3 80 6 4 3 6 2 1 0  
2 1.60 1.87 65.5 -1.24 -0.42 18.2 82 6 7 3 7 2 1 0  
3 2.08 2.08 78.9 -0.82 -0.55 10.1 86 2 6 7 7 2 3 0  ERY 1101 D
4 1.38 1.51 89.4 -0.95 -0.35 14.3 84 7 7 13 8 2 1 0  ERY 1101 D
5 1.42 2.83 97.1 -0.60 -0.47 8.4 88 4 6 5 6 3 1 0  
6 2.11 2.11 106.0 -0.74 -0.41 10.3 85 2 7 9 12 3 4 0  ERY 1101 D
7 1.50 3.26 106.7 -0.86 -0.48 12.1 87 5 7 7 8 2 1 0  
8 1.63 1.83 109.8 -1.27 -0.39 18.5 80 4 9 6 5 3 3 0  
9 1.36 1.64 126.4 -1.25 -0.44 11.5 87 6 6 14 8 2 2 0  ERY 1101 D
10 1.35 1.46 143.8 -0.94 -0.40 13.5 87 8 10 14 13 3 1 0  
11 1.37 1.40 143.6 -0.90 -0.41 12.7 84 8 7 12 11 5 2 0  
12 1.43 1.52 165.1 -0.21 -0.05 9.9 77 9 5 9 17 13 3 0  
13 1.30 1.56 179.4 0.21 -0.06 7.3 80 5 7 8 22 14 4 0  LMT 1101 B
14 1.46 1.68 177.8 -1.68 -0.60 16.9 84 11 8 11 7 4 2 0  
15 1.35 2.78 189.5 0.17 0.09 12.2 80 10 8 10 25 11 4 0  
16 1.27 1.37 214.1 -0.19 0.03 11.0 79 7 9 9 26 16 6 0  LMT 1101 B
17 1.74 1.80 227.6 -0.90 -0.47 11.6 83 12 12 15 14 10 3 0  
18 1.44 1.64 223.7 -0.30 0.01 15.4 79 13 9 9 20 10 4 0  
19 1.35 1.38 252.1 -0.58 -0.35 13.0 85 13 15 16 22 8 4 0  
20 1.22 1.26 262.3 -0.97 -0.34 13.2 82 14 14 16 18 12 5 0  
21 1.14 1.81 281.7 -0.81 -0.26 15.2 84 15 15 15 25 9 6 0  
22 1.37 1.68 279.5 -0.60 -0.29 14.6 81 13 16 15 21 8 4 0  
23 1.38 1.84 289.5 -0.59 -0.10 17.1 76 14 15 9 25 16 5 0  
24 1.21 1.73 291.3 -1.21 -0.41 14.9 83 15 14 17 19 10 5 0  
25 1.49 1.60 286.2 -0.99 -0.46 15.4 85 16 16 15 18 6 4 0  
26 1.56 1.56 299.7 -1.10 -0.35 19.2 80 17 18 13 22 9 4 0  
27 1.37 1.53 313.7 -1.07 -0.41 17.6 81 16 17 14 17 7 4 0  
28 1.21 1.45 315.8 -1.23 -0.36 17.7 83 18 16 14 21 8 6 0  
29 1.18 2.08 329.3 -1.28 -0.27 20.5 79 19 16 12 25 11 6 0  
30 1.41 1.73 327.3 -1.34 -0.42 18.4 78 20 17 16 16 11 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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