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PDBsum entry 4ziv

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Pore analysis for: 4ziv calculated with MOLE 2.0 PDB id
4ziv
Pores calculated on whole structure Pores calculated excluding ligands

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32 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.53 2.78 64.4 -1.21 -0.38 18.8 84 3 2 2 6 1 0 0  
2 1.37 1.88 80.2 -1.26 -0.58 9.4 88 3 6 16 5 4 2 0  
3 0.96 3.09 95.5 1.42 0.52 3.7 77 2 1 2 15 8 2 0  LMT 1101 B
4 1.51 4.44 107.3 -1.43 -0.57 15.3 89 6 8 10 9 2 2 0  
5 1.29 3.62 110.7 -0.82 -0.25 14.3 85 5 7 8 13 3 2 0  
6 1.27 1.38 114.0 -0.40 -0.20 10.6 84 6 4 10 15 3 2 0  
7 1.52 1.52 128.1 -0.87 -0.37 12.1 83 4 6 14 11 4 3 0  
8 2.05 2.23 130.3 -1.15 -0.57 11.5 88 5 9 10 8 3 3 0  
9 1.15 1.30 134.4 -0.42 -0.29 8.0 86 4 7 9 12 5 2 0  
10 1.59 4.58 130.5 -1.67 -0.47 20.4 82 7 6 8 7 4 1 0  
11 1.09 2.31 137.2 -0.43 -0.11 12.1 85 5 5 11 15 5 3 0  
12 1.51 1.52 139.4 -1.10 -0.53 12.5 85 5 5 10 5 6 2 0  
13 1.22 1.80 162.7 -1.00 -0.36 17.1 86 9 9 12 20 2 2 0  
14 0.96 3.09 169.1 0.03 0.02 8.9 79 5 4 8 17 9 3 0  LMT 1101 B
15 1.21 1.81 181.9 -1.19 -0.44 14.7 87 10 12 14 18 3 4 0  
16 1.90 1.90 192.8 -0.11 0.03 11.8 83 11 4 9 20 5 2 0  
17 1.23 1.22 198.9 -1.24 -0.40 16.0 87 10 11 16 16 4 3 0  
18 2.02 2.03 210.1 -0.16 -0.07 10.9 84 13 7 9 21 6 2 0  
19 1.57 4.45 219.0 -0.61 -0.13 14.3 81 15 10 9 17 6 2 0  
20 1.19 2.52 218.7 0.76 0.30 7.6 79 11 5 9 29 12 3 0  
21 1.33 3.43 223.3 -0.19 -0.03 13.1 83 16 11 10 29 5 2 0  
22 1.34 3.14 218.5 -1.17 -0.38 14.3 84 8 10 18 11 5 5 0  
23 1.15 1.81 255.2 -0.99 -0.41 12.8 87 10 13 18 17 5 4 0  
24 1.47 1.60 255.5 -0.30 -0.15 10.5 83 13 9 16 20 9 3 0  
25 1.18 1.34 301.4 -0.09 -0.11 9.0 85 7 10 20 30 13 4 0  
26 1.39 1.53 320.8 -0.54 -0.24 12.4 84 10 10 21 25 10 4 0  
27 1.33 4.35 330.8 -0.84 -0.32 14.3 83 15 17 20 21 11 4 0  
28 1.21 1.21 369.8 -0.46 -0.18 11.3 84 12 14 25 31 13 6 0  
29 1.20 1.31 405.6 -0.18 -0.07 11.7 82 16 16 25 47 11 10 0  
30 1.21 1.36 444.6 0.14 0.06 10.8 81 22 20 21 54 13 11 0  
31 1.66 3.49 33.5 -2.13 -0.46 24.8 85 5 2 2 1 2 0 0  
32 1.35 1.37 39.6 -1.23 -0.34 14.5 78 3 2 2 3 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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