PDBsum entry 4zim Go to PDB code:  Tunnel analysis for: 4zim calculated with MOLE 2.0 PDB id 4zim Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.55 21.8 -0.24 -0.25 13.5 76 3 3 1 5 1 0 0  4OK 1201 A 2 1.20 1.56 22.5 1.04 0.20 8.7 70 1 2 0 7 2 0 0  4OK 1201 A 3 1.27 1.54 28.5 -1.30 -0.41 19.7 80 3 4 2 4 1 0 0  4OK 1201 A 4 1.28 1.55 39.5 -1.03 -0.31 22.1 76 5 6 1 6 2 1 0  4OK 1201 A 5 1.29 1.56 21.6 0.30 -0.16 10.8 79 2 3 2 5 1 0 0  4OK 1201 B 6 1.28 1.56 24.3 -0.72 -0.28 17.0 79 3 2 2 4 1 0 0  4OK 1201 B 7 1.29 1.55 42.0 -1.08 -0.27 24.8 77 7 5 2 7 2 0 0  PTR 1008 B 4OK 1201 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.