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PDBsum entry 4zhh

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protein ligands metals Protein-protein interface(s) links
Metal binding protein/inhibitor PDB id
4zhh

 

 

 

 

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Contents
Protein chains
(+ 0 more) 177 a.a.
Ligands
4OL ×6
SO4 ×5
GOL ×5
Metals
_CL ×8
_SM ×6
Waters ×502
PDB id:
4zhh
Name: Metal binding protein/inhibitor
Title: Siderocalin-mediated recognition and cellular uptake of actinides
Structure: Neutrophil gelatinase-associated lipocalin. Chain: a, b, c, d, e, f. Fragment: residues 22-198. Synonym: ngal,25 kda alpha-2-microglobulin-related subunit of mmp-9, lipocalin-2,oncogene 24p3,siderocalin lcn2,p25. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: lcn2, hnl, ngal. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Resolution:
2.04Å     R-factor:   0.176     R-free:   0.199
Authors: B.E.Allred,P.B.Rupert,S.S.Gauny,D.D.An,C.Y.Ralston,M.Sturzbecher- Hoehne,R.K.Strong,R.J.Abergel
Key ref: B.E.Allred et al. (2015). Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides. Proc Natl Acad Sci U S A, 112, 10342-10347. PubMed id: 26240330 DOI: 10.1073/pnas.1508902112
Date:
24-Apr-15     Release date:   05-Aug-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P80188  (NGAL_HUMAN) -  Neutrophil gelatinase-associated lipocalin from Homo sapiens
Seq:
Struc:
198 a.a.
177 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 
DOI no: 10.1073/pnas.1508902112 Proc Natl Acad Sci U S A 112:10342-10347 (2015)
PubMed id: 26240330  
 
 
Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
B.E.Allred, P.B.Rupert, S.S.Gauny, D.D.An, C.Y.Ralston, M.Sturzbecher-Hoehne, R.K.Strong, R.J.Abergel.
 
  ABSTRACT  
 
Synthetic radionuclides, such as the transuranic actinides plutonium, americium, and curium, present severe health threats as contaminants, and understanding the scope of the biochemical interactions involved in actinide transport is instrumental in managing human contamination. Here we show that siderocalin, a mammalian siderophore-binding protein from the lipocalin family, specifically binds lanthanide and actinide complexes through molecular recognition of the ligands chelating the metal ions. Using crystallography, we structurally characterized the resulting siderocalin-transuranic actinide complexes, providing unprecedented insights into the biological coordination of heavy radioelements. In controlled in vitro assays, we found that intracellular plutonium uptake can occur through siderocalin-mediated endocytosis. We also demonstrated that siderocalin can act as a synergistic antenna to sensitize the luminescence of trivalent lanthanide and actinide ions in ternary protein-ligand complexes, dramatically increasing the brightness and efficiency of intramolecular energy transfer processes that give rise to metal luminescence. Our results identify siderocalin as a potential player in the biological trafficking of f elements, but through a secondary ligand-based metal sequestration mechanism. Beyond elucidating contamination pathways, this work is a starting point for the design of two-stage biomimetic platforms for photoluminescence, separation, and transport applications.
 

 

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