PDBsum entry 4zgd Go to PDB code:  Pore analysis for: 4zgd calculated with MOLE 2.0 PDB id 4zgd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.82 3.82 25.7 -2.33 -0.72 18.1 77 1 3 3 0 1 2 0   2 2.63 3.32 29.5 -1.80 -0.46 22.6 80 3 4 3 0 1 1 0   3 1.23 1.23 38.4 -1.32 -0.46 18.9 82 7 2 2 5 0 1 0   4 2.66 2.81 41.8 -1.81 -0.27 17.9 73 3 2 1 0 2 1 0   5 1.23 1.24 45.4 -0.42 -0.36 8.0 81 4 0 3 6 0 2 0   6 1.29 1.43 52.0 -1.61 -0.42 22.3 85 8 2 3 6 0 1 0   7 1.19 1.40 63.0 -0.70 -0.42 8.8 79 5 2 3 5 1 3 0   8 1.21 1.37 155.3 -1.06 0.07 16.5 79 14 8 8 10 13 3 0  CSD 102 C CSD 102 K CSD 104 K 9 1.09 1.15 241.4 -0.83 0.08 15.1 78 14 8 9 16 14 5 0  CSD 102 C CSD 102 I CSD 104 I 10 1.59 1.90 46.8 -1.28 -0.48 15.2 87 3 3 3 4 1 2 0   11 2.55 2.60 69.3 -1.35 -0.65 18.9 89 3 5 4 5 0 1 0   12 1.20 1.34 93.6 -1.33 -0.19 14.3 79 7 7 7 3 6 4 0  CSD 102 E CSD 104 E 13 2.09 2.06 140.7 -1.48 -0.44 15.2 77 4 7 5 4 3 5 0   14 2.12 2.27 48.8 -0.54 -0.10 8.9 74 2 0 2 5 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.