 |
PDBsum entry 4zg6
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4zg6 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4zg6
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
1 pore,
coloured by radius |
 |
9 pores,
coloured by radius
|
9 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.41 |
2.00 |
26.1 |
-0.71 |
-0.28 |
12.4 |
74 |
 |
3 |
1 |
1 |
2 |
0 |
1 |
2 |
 |
|
 |
 |
2 |
 |
1.23 |
1.36 |
30.3 |
-1.40 |
-0.51 |
14.7 |
81 |
4 |
1 |
3 |
2 |
2 |
1 |
0 |
NAG 1 D NAG 2 D
|
 |
3 |
 |
1.89 |
3.98 |
51.1 |
-0.44 |
0.33 |
9.0 |
68 |
6 |
0 |
4 |
4 |
8 |
3 |
0 |
4NY 910 A NAG 2 C BMA 3 C
|
 |
4 |
 |
1.15 |
1.83 |
69.5 |
-2.04 |
-0.19 |
21.6 |
75 |
6 |
5 |
1 |
3 |
4 |
3 |
0 |
|
 |
5 |
 |
1.99 |
2.41 |
80.4 |
-0.67 |
0.31 |
10.5 |
71 |
5 |
1 |
4 |
5 |
9 |
3 |
0 |
4NY 910 A
|
 |
6 |
 |
1.35 |
1.87 |
100.5 |
-1.32 |
-0.33 |
18.6 |
79 |
9 |
7 |
6 |
4 |
3 |
2 |
2 |
|
 |
7 |
 |
1.31 |
1.83 |
105.6 |
-1.28 |
-0.07 |
10.5 |
74 |
8 |
2 |
6 |
3 |
6 |
6 |
0 |
NAG 2 C BMA 3 C
|
 |
8 |
 |
1.38 |
1.88 |
120.2 |
-1.22 |
-0.08 |
17.5 |
75 |
10 |
5 |
6 |
5 |
9 |
2 |
2 |
4NY 910 A
|
 |
9 |
 |
1.12 |
1.44 |
106.9 |
-1.29 |
-0.10 |
16.4 |
73 |
9 |
2 |
4 |
3 |
5 |
4 |
0 |
SCN 913 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |