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PDBsum entry 4zfm

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Pore analysis for: 4zfm calculated with MOLE 2.0 PDB id
4zfm
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.72 25.5 -0.88 -0.32 14.3 80 1 2 1 4 2 0 0  
2 1.82 2.07 31.8 -1.55 -0.27 16.5 74 5 3 2 1 3 0 0  GOL 502 B
3 2.74 4.87 55.5 -2.75 -0.71 29.9 83 5 9 3 2 1 0 0  
4 1.56 1.96 59.4 -1.55 -0.62 15.8 79 5 5 5 4 1 3 0  
5 1.84 2.15 61.5 -2.30 -0.57 26.8 86 7 12 3 3 2 0 0  
6 1.62 1.97 65.6 -1.63 -0.53 18.6 82 7 7 5 5 2 3 0  
7 2.49 2.49 69.8 -1.28 -0.34 18.0 79 2 9 4 4 5 1 0  
8 1.60 1.90 91.8 -1.89 -0.60 19.7 84 6 9 5 6 0 3 0  
9 1.51 1.90 94.9 -2.13 -0.43 23.0 81 6 10 3 3 4 1 0  
10 2.17 3.17 97.9 -2.01 -0.46 30.4 81 12 10 2 4 1 1 0  
11 2.49 2.49 102.4 -0.73 -0.29 14.7 80 5 7 5 9 4 1 0  IMD 505 C
12 1.82 2.18 103.9 -1.92 -0.43 28.1 83 14 12 2 5 2 1 0  
13 1.79 1.78 112.4 -2.17 -0.54 30.0 85 9 13 3 7 0 2 0  
14 1.46 1.90 126.1 -0.61 -0.19 13.6 76 6 6 4 8 5 2 0  IMD 505 C
15 1.57 1.88 130.7 -1.63 -0.45 22.6 82 12 9 4 7 0 4 0  
16 2.17 3.17 156.4 -1.32 -0.36 22.8 82 11 13 4 11 2 2 0  IMD 505 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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