spacer
spacer

PDBsum entry 4zfj

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4zfj calculated with MOLE 2.0 PDB id
4zfj
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 2.54 37.2 -0.43 -0.33 13.7 75 1 3 2 7 0 2 0  
2 2.39 2.75 69.5 -1.45 -0.68 17.5 89 8 10 7 4 0 2 0  XPE 302 H XPE 302 K
3 1.52 2.88 25.2 -2.95 -0.55 37.6 83 3 3 0 1 0 1 0  
4 2.64 2.64 30.7 -2.74 -0.60 34.5 84 4 4 0 2 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer