spacer
spacer

PDBsum entry 4zem

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4zem calculated with MOLE 2.0 PDB id
4zem
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.81 3.81 28.0 -2.89 -0.91 35.8 80 2 7 2 1 0 0 0  
2 1.65 1.82 40.6 -1.19 -0.52 17.0 83 4 5 4 3 1 2 0  
3 2.98 3.30 51.5 -1.77 -0.76 28.7 84 2 12 1 5 0 0 0  
4 3.00 3.25 60.2 -1.89 -0.76 27.8 83 3 11 3 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer