PDBsum entry 4zdi Go to PDB code:  Pore analysis for: 4zdi calculated with MOLE 2.0 PDB id 4zdi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.63 1.88 50.5 -1.76 -0.54 28.3 84 3 10 1 4 0 1 0   2 1.45 2.62 54.3 -1.40 -0.28 23.9 86 8 5 2 4 0 1 0   3 1.12 1.18 63.3 -0.48 -0.03 11.9 83 3 4 6 8 3 3 0  CA 601 E 4 2.47 2.67 123.1 -1.66 -0.44 21.6 88 14 11 7 9 1 1 0   5 1.17 1.17 141.7 -0.54 -0.02 19.9 81 14 12 4 14 6 2 0   6 1.24 1.46 168.0 -1.28 -0.38 17.2 88 13 11 14 11 4 3 0  CA 601 E 7 1.19 1.21 186.8 -0.93 -0.34 14.3 84 10 14 14 15 7 4 0  CA 601 E 8 1.19 1.19 222.2 -0.76 -0.17 16.6 84 18 18 13 21 9 3 0  CA 601 E 9 1.24 1.24 272.8 -1.04 -0.29 20.1 83 24 25 12 21 10 3 0   10 1.20 1.21 315.4 -1.38 -0.45 19.4 82 24 26 17 17 10 6 0  CA 601 B 11 1.37 1.92 31.7 -2.26 -0.58 27.8 84 8 5 0 0 1 0 0   12 1.36 1.94 34.7 -1.87 -0.60 23.4 89 6 4 2 1 1 0 0   13 2.05 3.14 42.2 -2.49 -0.49 32.2 81 6 3 3 1 1 1 0   14 1.14 1.40 36.4 -0.70 -0.31 9.7 75 3 1 2 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.