PDBsum entry 4zcf Go to PDB code:  Pore analysis for: 4zcf calculated with MOLE 2.0 PDB id 4zcf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.64 28.3 -1.51 -0.54 19.0 85 4 1 2 0 1 0 0  DA 1 D DT 2 D DG 18 E DT 19 E 2 1.78 2.18 32.9 -2.24 -0.59 20.4 79 2 3 3 0 1 0 0  DC 4 D DG 18 E DT 19 E DA 20 E 3 1.47 1.83 40.6 -1.27 -0.37 16.5 88 5 2 5 1 1 1 0  DT 20 D DA 1 E DA 2 E 4 2.21 2.21 43.4 -2.28 -0.69 24.2 85 8 5 3 2 1 0 0   5 1.24 1.23 45.7 -0.08 -0.16 14.1 84 2 2 3 4 2 0 0  DA 1 E DA 2 E 6 2.08 2.82 51.1 -2.22 -0.47 23.4 84 6 4 6 1 2 1 0  DA 1 D DG 18 E DT 19 E 7 2.19 2.47 51.5 -1.54 -0.45 24.5 90 5 5 5 3 1 0 0  AMP 1001 C DA 1 E DA 2 E 8 2.01 2.11 52.0 -0.96 -0.31 16.5 83 7 2 4 3 1 1 0   9 2.10 3.11 58.9 -1.75 -0.20 19.7 78 6 5 5 3 4 2 0  DG 18 E DT 19 E 10 1.83 1.96 62.9 -1.08 -0.29 26.2 86 6 8 4 5 0 0 0   11 1.23 1.25 68.4 -0.73 -0.30 18.1 87 5 6 6 8 3 0 0  AMP 1001 C 12 1.06 1.50 76.7 -1.22 -0.24 17.3 80 10 6 6 6 4 0 0   13 2.24 2.24 78.7 -1.22 -0.65 13.7 83 6 0 3 1 1 0 0  DA 5 D DT 17 D DG 18 D DA 19 D DT 20 D DA 1 E DA 2 E DT 3 E DC 4 E DA 5 E DT 6 E DA 7 E DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 14 1.41 1.40 80.7 -1.27 -0.48 17.7 82 9 4 6 5 3 1 0  DA 1 D DG 18 E DT 19 E 15 1.43 1.43 89.3 -1.81 -0.45 22.8 82 9 8 8 5 3 2 0   16 2.74 2.74 94.4 -1.22 -0.60 16.4 83 8 7 7 5 0 0 0  DA 5 D DA 11 D DG 12 D DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 17 1.46 2.83 100.9 -2.06 -0.49 18.9 78 10 7 9 5 5 2 0  DA 5 D DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 18 1.18 1.66 101.0 -1.34 -0.50 20.8 83 7 7 6 5 2 1 0  DA 1 D DT 2 D DA 3 D DG 12 D DA 13 D DC 13 E DT 14 E DG 15 E DC 16 E DT 17 E 19 1.65 2.76 105.4 -1.51 -0.52 22.5 89 8 11 9 3 0 0 0  DG 12 D DA 13 D DC 14 D DT 15 D DA 1 E DA 2 E DC 4 E DA 5 E DT 6 E 20 1.16 1.45 105.4 -0.77 -0.21 15.5 77 6 8 3 8 2 3 0   21 1.80 1.81 106.2 -1.77 -0.45 21.6 82 10 8 8 4 3 3 0   22 1.58 1.61 109.0 -1.82 -0.69 20.6 90 6 7 11 5 0 0 0   23 1.10 1.37 113.8 -1.22 -0.29 13.7 80 8 6 9 8 6 1 0  DA 5 D DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 24 1.72 2.78 112.2 -1.62 -0.40 19.3 82 12 7 10 4 2 3 0  DA 1 D DG 12 D DA 13 D DC 13 E DT 14 E DG 15 E DC 16 E DG 18 E DT 19 E 25 1.61 1.68 118.4 -1.75 -0.71 20.3 87 10 10 6 4 1 0 0  DA 5 D DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 26 1.59 1.62 127.3 -1.62 -0.63 17.7 87 10 14 14 7 2 0 0  MN 702 A DA 11 D DG 12 D DG 8 E 27 1.14 1.35 130.8 -1.22 -0.32 18.3 82 14 9 7 8 5 2 0  AMP 1001 C DT 20 D DA 1 E 28 1.44 1.44 132.9 -1.70 -0.46 24.7 86 13 13 8 5 2 1 0  AMP 1001 C DT 20 D DA 1 E 29 1.67 1.71 144.2 -1.84 -0.71 20.3 87 9 10 8 3 2 0 0  DT 17 D DG 18 D DA 19 D DT 20 D DA 1 E DA 2 E DT 3 E DC 4 E DA 5 E DT 6 E DA 7 E DG 8 E DT 9 E 30 2.43 2.60 183.2 -1.89 -0.68 23.9 85 13 13 10 5 1 0 0  DA 5 D DG 8 E DT 9 E DC 10 E DT 11 E DA 20 E 31 1.60 2.08 27.2 -2.06 -0.79 23.9 87 1 4 2 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.