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PDBsum entry 4zbi

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Pore analysis for: 4zbi calculated with MOLE 2.0 PDB id
4zbi
Pores calculated on whole structure Pores calculated excluding ligands

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26 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.79 1.99 49.4 -2.05 -0.49 25.3 90 7 3 3 3 0 1 0  4M6 400 C 4M6 400 H
2 3.15 3.14 49.6 -1.77 -0.41 27.5 82 9 10 2 3 2 0 0  
3 2.32 3.78 51.3 -2.64 -0.89 36.6 92 4 12 6 1 0 0 0  
4 2.44 5.74 52.4 -3.63 -0.67 45.6 82 10 6 1 0 0 0 0  
5 2.33 3.78 57.1 -3.13 -0.86 41.5 86 6 14 4 0 1 0 0  
6 2.87 3.39 57.8 -1.93 -0.61 24.5 88 9 9 8 3 0 0 0  
7 2.33 3.78 60.2 -2.58 -0.69 36.9 85 9 12 5 2 1 0 0  
8 2.50 4.06 61.3 -2.63 -0.77 35.0 87 8 15 4 1 1 0 0  
9 1.50 1.65 61.4 -2.51 -0.73 27.3 88 9 5 3 2 0 0 0  
10 2.55 2.83 64.9 -1.37 -0.20 23.9 83 10 6 3 5 4 0 0  4M6 400 G
11 2.06 4.06 65.1 -1.08 -0.19 26.3 80 12 9 1 6 3 0 0  
12 3.75 3.90 67.1 -2.02 -0.50 27.5 86 11 9 6 3 0 0 0  
13 1.68 2.29 70.1 -2.41 -0.55 23.3 86 8 4 6 2 1 0 0  
14 1.17 2.41 82.0 0.28 0.28 16.2 83 5 2 1 12 4 0 0  4M6 400 I
15 1.80 1.99 88.2 -1.64 -0.25 25.4 86 12 7 5 5 3 0 0  4M6 400 G 4M6 400 H
16 2.39 2.42 89.2 -2.01 -0.68 23.0 88 10 7 6 3 1 0 0  
17 2.45 5.68 96.1 -2.49 -0.67 34.9 88 12 16 5 2 1 0 0  
18 2.41 5.75 98.1 -2.77 -0.63 37.4 85 13 17 4 1 2 0 0  
19 2.32 3.79 101.5 -1.79 -0.41 28.5 88 11 12 9 6 4 0 0  4M6 400 G
20 1.90 2.10 105.2 -2.30 -0.61 32.6 89 15 14 9 5 1 0 0  4M6 400 C 4M6 400 H
21 2.54 2.75 108.3 -1.83 -0.34 28.2 85 14 14 6 6 5 0 0  4M6 400 G
22 1.89 2.06 110.3 -2.35 -0.54 33.1 86 16 16 6 5 2 0 0  4M6 400 C 4M6 400 H
23 1.76 1.97 112.1 -2.15 -0.59 30.7 89 16 17 9 6 1 0 0  4M6 400 C 4M6 400 H
24 2.32 2.42 113.1 -2.06 -0.51 28.3 86 13 10 4 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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