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PDBsum entry 4z9g

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Pore analysis for: 4z9g calculated with MOLE 2.0 PDB id
4z9g
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.30 25.6 -1.08 0.03 10.7 84 2 1 3 3 2 1 0  
2 1.88 1.90 36.7 0.94 0.38 7.4 72 1 3 2 9 3 0 0  1Q5 1204 A
3 1.21 1.59 39.4 -2.39 -0.26 22.2 82 9 1 4 1 2 0 0  
4 3.20 3.33 40.6 -0.83 0.11 9.4 76 2 1 4 2 5 1 0  
5 1.64 1.89 43.0 -0.51 0.02 14.1 82 3 4 3 5 2 0 0  
6 1.77 1.98 43.4 -0.89 -0.22 16.1 87 3 5 4 4 2 0 0  
7 2.44 2.95 43.7 -0.23 0.25 9.7 79 2 3 3 5 5 0 0  
8 1.69 1.76 48.0 0.69 0.03 6.4 80 0 2 3 15 5 0 0  1Q5 1204 B
9 2.03 4.19 48.3 2.09 0.85 1.9 79 1 0 2 15 4 0 1  OLA 1201 C OLA 1202 C
10 1.69 4.43 54.1 -2.01 -0.63 23.8 87 10 7 3 6 1 2 0  
11 1.79 1.95 65.0 -0.49 -0.05 12.1 80 2 5 5 13 5 0 0  OLA 1203 C 1Q5 1205 C
12 1.79 1.81 69.7 -0.70 -0.14 16.3 77 5 4 3 11 4 0 1  1Q5 1204 B
13 1.93 4.25 70.1 1.60 0.68 5.0 80 3 0 2 15 4 0 2  OLA 1201 C OLA 1202 C
14 1.44 1.53 79.8 0.35 0.23 9.5 77 3 6 5 16 7 0 0  1Q5 1204 A
15 1.62 2.80 93.7 -0.52 0.08 15.0 77 8 8 5 12 8 0 1  1Q5 1204 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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