PDBsum entry 4z8d Go to PDB code:  Tunnel analysis for: 4z8d calculated with MOLE 2.0 PDB id 4z8d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.81 23.5 1.18 0.53 2.2 79 1 0 4 8 4 0 1  4LB 401 B 2 1.43 1.73 28.9 1.26 0.56 5.2 82 2 1 2 9 3 1 0  4LB 401 B 3 1.34 1.53 33.6 0.38 0.22 6.8 83 2 1 2 9 3 1 0  4LB 401 A 4 1.53 3.65 15.3 -0.40 -0.03 14.7 73 1 1 0 5 2 1 0  SO4 402 A 5 1.53 3.65 19.1 -0.03 -0.01 5.6 74 1 0 2 3 2 1 0  SO4 402 A 6 1.54 3.65 34.8 -0.78 -0.30 8.2 78 2 0 4 3 2 1 0  SO4 402 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.