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PDBsum entry 4z7z

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Top Page protein dna_rna ligands tunnels links
Tunnel analysis for: 4z7z calculated with MOLE 2.0 PDB id
4z7z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.45 30.2 -0.35 -0.12 4.9 74 1 0 2 3 3 2 0  ACY 402 A DC 17 C DC 15 D DA 16 D ORP 17 D
2 1.29 1.45 38.6 -0.44 -0.15 5.6 76 2 0 3 3 3 2 0  ACY 402 A DG 16 C DC 17 C DA 16 D ORP 17 D
3 2.38 2.38 20.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DA 19 C DT 20 C DG 21 C DG 22 C DA 23 C DT 10 D
DC 11 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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