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PDBsum entry 4z7l

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Top Page protein dna_rna ligands Protein-protein interface(s) pores links
Pore analysis for: 4z7l calculated with MOLE 2.0 PDB id
4z7l
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.26 36.8 -0.92 -0.38 10.2 87 2 0 2 2 0 0 0  G 16 C C 17 C A 18 C A 19 C A 20 C C 25 C A 26 C
G 16 F
2 2.15 2.30 115.4 -1.59 -0.53 23.1 84 11 5 3 4 0 0 0  SO4 301 A G 16 F C 17 F A 19 F A 20 F U 22 F A 23
F A 24 F C 25 F A 21 I U 22 I A 23 I A 24 I
3 2.08 2.26 115.9 -1.82 -0.51 26.6 86 10 7 3 5 0 0 0  SO4 301 A G 16 F C 17 F A 19 F A 20 F U 22 F A 23
F A 24 F C 25 F C 25 I

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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