spacer
spacer

PDBsum entry 4z76

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4z76 calculated with MOLE 2.0 PDB id
4z76
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.51 2.69 29.7 -1.42 -0.36 11.6 76 2 3 3 1 5 2 0  
2 2.45 2.55 44.7 -1.59 -0.42 15.9 78 4 3 3 1 4 3 0  GOL 304 A SO4 105 E
3 2.73 3.95 48.5 -3.38 -0.74 41.2 83 6 5 3 0 1 0 0  EDO 301 A
4 1.25 2.93 55.3 -1.35 -0.41 18.6 80 8 3 2 4 2 2 0  GOL 304 A SO4 105 E
5 1.26 2.23 57.8 -1.07 -0.36 12.8 80 4 5 6 5 5 1 0  GOL 303 A GOL 304 A SO4 105 E
6 1.24 2.35 85.8 -1.85 -0.46 25.8 80 11 10 4 6 2 1 0  EDO 301 A GOL 303 A GOL 304 A SO4 105 E
7 2.02 2.41 96.7 -1.69 -0.39 24.1 81 10 10 5 7 4 2 0  EDO 301 A GOL 304 A EDO 303 B SO4 105 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer