PDBsum entry 4z53 Go to PDB code:  Tunnel analysis for: 4z53 calculated with MOLE 2.0 PDB id 4z53 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.82 43.4 -0.57 -0.12 14.8 88 3 3 2 7 2 1 0  DA 10 E DT 11 E DG 12 E DA 13 E DC 8 F DT 10 F DG 11 F 2 1.31 2.32 15.8 1.11 0.57 12.2 82 2 1 1 7 0 0 0   3 1.17 1.35 17.6 2.68 0.71 1.6 82 2 0 1 8 0 0 0   4 1.34 1.46 27.1 2.41 0.75 5.0 78 5 1 2 14 0 0 0   5 1.33 1.46 19.8 1.84 0.69 5.0 84 1 0 0 7 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.