PDBsum entry 4z48 Go to PDB code:  Tunnel analysis for: 4z48 calculated with MOLE 2.0 PDB id 4z48 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 38.3 -0.28 0.14 9.3 72 2 2 3 6 5 1 0  MSE 233 B 1PE 301 B 2 1.37 1.37 43.2 -2.20 -0.61 22.1 81 3 6 5 1 3 1 0   3 1.41 1.41 49.0 0.07 0.42 10.5 68 4 2 2 6 9 1 0  MSE 57 B MSE 138 B MSE 233 B 1PE 301 B IOD 303 B 4 1.43 1.90 50.7 -1.88 -0.55 20.1 80 4 7 5 2 2 2 0   5 1.36 2.30 51.9 -1.39 -0.14 21.4 72 4 7 2 4 7 1 0  MSE 233 B 1PE 301 B 6 1.29 1.29 53.9 -1.91 -0.66 19.2 84 5 8 6 1 2 1 0   7 1.29 2.97 96.4 -0.91 -0.16 16.2 79 8 11 9 10 8 0 0  MSE 57 A MSE 233 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.