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PDBsum entry 4z0p
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Tunnel analysis for: 4z0p calculated with  MOLE 2.0
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PDB id
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4z0p
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.30 |
1.43 |
22.3 |
-0.06 |
-0.04 |
10.7 |
75 |
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3 |
0 |
0 |
5 |
1 |
1 |
0 |
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OXD 402 A NDP 407 A
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2 |
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1.35 |
1.38 |
23.8 |
-0.79 |
0.17 |
22.4 |
81 |
5 |
2 |
1 |
4 |
1 |
0 |
0 |
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3 |
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1.29 |
1.43 |
25.3 |
-0.33 |
0.00 |
13.5 |
79 |
3 |
1 |
1 |
6 |
2 |
0 |
0 |
OXD 402 A NDP 407 A
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4 |
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1.29 |
1.43 |
25.4 |
-0.08 |
0.03 |
10.7 |
76 |
4 |
0 |
1 |
7 |
2 |
2 |
0 |
OXD 402 A NDP 407 A
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5 |
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1.48 |
2.87 |
25.6 |
-0.63 |
-0.09 |
15.1 |
77 |
3 |
1 |
1 |
5 |
2 |
0 |
0 |
OXD 402 A NDP 407 A
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6 |
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2.30 |
2.47 |
25.7 |
-0.21 |
-0.03 |
11.1 |
75 |
4 |
0 |
1 |
6 |
2 |
2 |
0 |
OXD 402 A NDP 407 A
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7 |
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1.36 |
1.37 |
47.2 |
-0.69 |
0.09 |
15.6 |
79 |
6 |
0 |
1 |
7 |
2 |
1 |
0 |
OXD 402 A NDP 407 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program