PDBsum entry 4z0l Go to PDB code:  Pore analysis for: 4z0l calculated with MOLE 2.0 PDB id 4z0l Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.40 27.5 -1.03 -0.35 11.8 86 1 3 3 3 1 1 0   2 1.20 1.20 38.6 -1.11 -0.44 12.2 79 2 5 4 3 1 2 1   3 1.34 1.35 44.7 -1.24 -0.43 12.1 77 4 3 6 3 2 1 2   4 1.16 1.93 45.9 -2.18 -0.66 21.8 80 4 5 4 2 2 0 0  NAG 1 H NAG 2 H 5 1.23 1.25 46.8 -1.27 -0.47 13.9 74 3 4 4 3 1 3 1   6 1.23 1.26 54.7 -1.61 -0.28 18.4 75 5 4 3 3 3 3 0   7 2.60 3.03 55.3 -2.12 -0.38 15.3 79 5 0 6 1 3 1 0   8 2.57 3.33 57.7 -1.84 -0.32 13.9 78 6 0 6 1 3 1 0   9 2.56 2.91 66.0 -1.76 -0.32 13.0 75 6 0 6 2 4 1 0   10 1.20 1.48 70.8 -1.39 -0.35 18.8 83 4 7 4 5 2 1 0   11 2.52 2.88 75.6 -1.44 -0.31 12.2 78 7 0 8 2 4 0 0   12 1.68 1.64 79.3 -1.16 -0.35 14.4 77 5 6 6 6 2 2 2   13 2.46 3.09 79.7 -2.34 -0.42 24.3 80 7 4 8 2 3 2 0   14 2.50 3.09 84.9 -2.04 -0.37 21.8 79 8 4 9 3 3 2 0   15 1.16 1.19 88.6 -1.76 -0.33 14.0 76 7 3 6 3 4 3 0   16 1.54 1.70 91.7 -1.35 -0.23 16.7 76 7 5 7 6 5 2 2   17 2.53 3.08 98.4 -1.74 -0.32 22.5 78 12 3 7 4 4 2 0   18 1.15 1.22 100.9 -1.67 -0.41 20.2 84 8 7 9 5 2 1 0   19 1.22 1.25 100.1 -1.66 -0.34 14.7 77 9 4 8 3 4 3 0   20 1.66 1.73 101.6 -1.49 -0.35 19.6 78 6 7 6 6 2 1 2  NAG 1 E NAG 2 E 21 2.51 2.98 102.7 -2.19 -0.46 19.8 80 10 4 10 3 3 1 0   22 2.53 3.08 103.3 -2.16 -0.45 18.6 79 8 4 10 2 4 2 0   23 1.81 1.79 109.4 -1.54 -0.42 17.6 79 9 6 11 6 2 2 2   24 2.53 2.95 116.8 -1.81 -0.37 20.5 79 12 3 8 3 5 2 0   25 1.38 1.48 121.8 -1.62 -0.32 18.6 78 11 6 12 6 5 2 2   26 1.19 1.24 125.3 -1.62 -0.61 13.6 83 4 6 9 3 1 4 1  NAG 702 B 27 1.20 1.24 131.7 -1.57 -0.34 19.6 80 11 7 11 6 5 3 0   28 1.47 1.62 153.3 -1.52 -0.29 15.6 77 11 8 12 7 7 2 2   29 1.44 1.56 157.2 -1.76 -0.27 17.4 78 11 9 12 6 8 2 2  NAG 1 G NAG 2 G 30 1.43 1.53 191.6 -1.46 -0.24 17.3 78 13 13 16 11 8 3 2  NAG 1 G NAG 2 G NAG 1 H NAG 2 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.