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PDBsum entry 4z0c

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Top Page protein dna_rna ligands Protein-protein interface(s) pores links
Pore analysis for: 4z0c calculated with MOLE 2.0 PDB id
4z0c
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.10 2.37 45.7 -1.71 -0.39 24.6 90 4 1 1 1 1 0 0  DC 2 B DG 4 B DA 9 B DC 10 B DC 11 B DC 12 B DC
13 B
2 1.83 1.83 46.9 -1.65 -0.30 19.1 76 9 1 2 0 3 2 0  DA 1 C DC 2 C DG 4 C DG 8 C DA 9 C DC 10 C DC 12 C
3 1.23 2.51 81.8 -1.63 -0.28 20.5 77 11 1 2 1 5 2 0  DG 4 B DG 8 B DA 9 B DC 10 B DA 1 C DC 2 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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