PDBsum entry 4yf9 Go to PDB code:  Pore analysis for: 4yf9 calculated with MOLE 2.0 PDB id 4yf9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 1.94 26.4 -0.99 -0.54 13.9 92 1 2 1 3 0 1 0   2 2.21 2.29 39.8 -1.36 -0.53 20.3 88 3 4 3 6 1 1 0   3 3.09 3.63 57.7 -2.40 -0.71 17.0 92 5 3 13 2 1 1 0   4 3.16 3.68 60.2 -2.24 -0.72 13.8 91 4 3 13 2 1 2 0   5 3.08 3.08 61.6 -1.69 -0.62 15.7 92 4 4 9 7 0 2 0   6 1.61 1.75 69.3 -0.57 -0.27 13.9 85 4 5 1 10 1 3 0   7 3.11 3.79 78.8 -1.51 -0.67 12.9 96 4 3 16 6 1 1 0   8 1.99 2.03 79.3 -0.53 -0.50 4.5 89 2 3 7 9 1 6 0   9 4.35 4.87 80.0 -1.45 -0.71 10.3 98 4 2 16 7 0 2 0   10 3.18 3.77 81.3 -1.38 -0.69 10.3 95 3 3 16 6 1 2 0   11 2.22 2.23 85.0 -2.26 -0.70 19.4 89 8 5 12 5 1 2 0   12 2.38 2.50 86.4 -1.51 -0.57 14.9 91 6 6 16 10 1 2 0   13 3.97 4.12 87.2 -1.22 -0.65 11.7 93 4 6 13 8 0 3 0   14 2.22 2.22 87.6 -2.12 -0.70 17.4 88 7 5 12 5 1 3 0   15 2.25 2.34 92.6 -2.07 -0.61 19.1 85 7 5 6 5 1 2 0   16 3.25 3.26 100.6 -1.86 -0.73 15.3 90 4 6 10 5 0 3 0   17 3.24 3.25 116.0 -1.35 -0.69 8.6 93 3 5 17 7 0 4 0   18 1.99 2.08 119.8 -1.51 -0.55 13.5 87 8 6 14 13 1 6 0   19 1.97 2.04 120.6 -1.27 -0.59 11.3 87 6 6 11 11 1 7 0   20 1.20 1.32 131.4 -0.87 -0.37 8.8 88 6 6 24 17 6 2 1   21 1.32 1.60 188.4 -1.32 -0.59 16.0 87 7 12 9 10 3 4 0   22 1.21 1.36 193.4 -1.22 -0.42 16.1 79 11 8 3 17 3 7 0   23 1.21 1.31 261.1 -2.03 -0.64 20.3 83 13 16 10 13 3 7 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.