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PDBsum entry 4y3c

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Pore analysis for: 4y3c calculated with MOLE 2.0 PDB id
4y3c
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.63 33.1 -0.08 -0.15 8.8 84 4 1 3 5 1 0 0  
2 1.33 2.12 55.0 -0.79 -0.25 13.3 83 4 1 2 4 1 3 0  
3 1.54 3.23 73.2 -0.86 -0.24 9.6 81 6 2 2 3 2 5 0  
4 1.52 3.23 78.0 -0.83 -0.07 12.4 78 7 3 3 3 4 5 0  
5 2.60 2.88 134.6 -1.85 -0.43 26.1 84 15 7 5 8 2 0 0  
6 1.29 1.31 137.7 -2.36 -0.36 31.3 78 15 9 5 7 5 1 0  
7 2.57 2.56 142.1 -2.67 -0.46 30.6 77 15 10 5 5 3 4 0  
8 1.55 3.16 172.1 -1.40 -0.41 17.2 82 12 8 8 9 3 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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