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PDBsum entry 4y2o
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Pore analysis for: 4y2o calculated with MOLE 2.0
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PDB id
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4y2o
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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12 pores,
coloured by radius
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12 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
2.64 |
35.1 |
2.97 |
0.94 |
0.6 |
76 |
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0 |
0 |
0 |
14 |
3 |
1 |
0 |
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2 |
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1.35 |
1.58 |
38.8 |
0.93 |
0.15 |
4.2 |
80 |
1 |
0 |
3 |
12 |
1 |
2 |
0 |
PGE 302 A
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3 |
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1.20 |
1.34 |
45.3 |
-1.35 |
-0.36 |
23.4 |
84 |
3 |
4 |
2 |
3 |
1 |
0 |
0 |
PGE 301 A
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4 |
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1.28 |
1.28 |
50.7 |
-0.75 |
-0.15 |
12.3 |
88 |
3 |
1 |
5 |
7 |
2 |
0 |
0 |
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5 |
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1.29 |
1.28 |
63.2 |
0.82 |
0.28 |
8.5 |
78 |
2 |
1 |
3 |
14 |
2 |
2 |
0 |
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6 |
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1.23 |
3.96 |
88.9 |
0.76 |
0.24 |
9.4 |
75 |
2 |
2 |
2 |
15 |
4 |
1 |
0 |
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7 |
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1.22 |
1.63 |
92.6 |
-0.39 |
0.05 |
16.3 |
80 |
6 |
7 |
2 |
17 |
3 |
2 |
0 |
NI 202 B
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8 |
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1.17 |
2.80 |
105.1 |
1.24 |
0.44 |
7.2 |
76 |
2 |
2 |
2 |
21 |
7 |
0 |
0 |
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9 |
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1.28 |
4.58 |
109.1 |
0.23 |
0.03 |
8.9 |
80 |
3 |
2 |
5 |
18 |
5 |
1 |
0 |
PGE 302 A
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10 |
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1.24 |
2.07 |
123.8 |
-0.40 |
0.08 |
16.5 |
83 |
7 |
6 |
5 |
21 |
4 |
1 |
0 |
NI 202 B
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11 |
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1.20 |
1.22 |
155.5 |
0.58 |
0.26 |
10.1 |
82 |
6 |
5 |
4 |
29 |
5 |
0 |
0 |
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12 |
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1.19 |
1.33 |
175.8 |
-0.04 |
0.05 |
13.0 |
85 |
8 |
6 |
7 |
28 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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