PDBsum entry 4y1a Go to PDB code:  Pore analysis for: 4y1a calculated with MOLE 2.0 PDB id 4y1a Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.81 3.02 35.0 -0.98 -0.47 13.8 82 3 4 3 3 1 1 2   2 1.18 1.45 36.2 0.87 0.06 6.5 81 2 4 1 7 2 2 0   3 1.19 1.36 39.1 0.03 0.05 9.2 79 2 1 3 9 2 4 0   4 2.34 2.89 66.1 -1.54 -0.56 16.4 78 2 4 4 1 1 2 2   5 2.17 4.57 166.3 -1.79 -0.52 19.9 81 7 12 8 5 3 2 0   6 1.31 1.54 48.6 -0.50 -0.42 12.6 84 1 3 2 4 1 1 0   7 1.15 1.18 60.0 -0.51 -0.38 9.1 87 4 3 5 8 3 0 0   8 1.68 2.87 138.9 -1.57 -0.45 20.9 85 8 7 9 6 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.