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PDBsum entry 4xr8

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4xr8 calculated with MOLE 2.0 PDB id
4xr8
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 1.72 32.6 -1.54 -0.40 8.3 84 2 2 6 2 3 1 0  
2 1.12 1.26 32.9 -1.86 -0.45 12.2 75 1 2 3 1 2 1 0  
3 1.24 1.23 36.6 -1.45 -0.23 19.1 75 5 2 3 1 3 1 1  
4 2.06 2.50 38.8 -1.39 -0.21 19.9 76 5 6 4 3 3 0 1  
5 2.30 2.46 40.1 -1.27 -0.58 10.4 88 2 2 3 2 0 1 0  
6 1.16 1.16 46.0 -1.95 -0.44 23.8 80 8 5 2 0 3 0 0  EDO 203 F
7 1.17 1.17 50.2 -2.15 -0.41 27.2 77 9 6 2 0 3 0 0  EDO 203 F
8 1.17 1.16 58.4 -1.46 -0.30 13.3 75 5 4 7 1 6 1 1  EDO 203 F
9 0.87 1.92 61.6 -1.80 -0.33 25.4 77 9 8 4 2 5 1 0  
10 1.18 1.19 66.0 -1.98 -0.45 22.3 78 10 4 3 0 3 1 0  EDO 203 F
11 1.15 1.16 91.6 -2.20 -0.46 26.6 80 13 8 6 3 6 0 1  EDO 203 F
12 1.22 2.92 112.3 -2.13 -0.47 19.5 82 10 5 8 5 4 4 0  
13 1.14 1.13 118.5 -1.83 -0.50 17.4 83 10 7 9 4 4 1 1  PEG 402 A EDO 203 F
14 0.87 1.92 144.3 -1.94 -0.40 23.5 80 17 10 9 6 8 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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