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PDBsum entry 4xr1

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 4xr1 calculated with MOLE 2.0 PDB id
4xr1
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.39 20.4 -0.66 -0.29 10.1 72 2 0 2 4 1 0 0  DA 330 C DA 331 C
2 1.20 1.39 37.2 -0.51 -0.02 15.5 69 3 0 2 4 2 1 0  DA 330 C DA 331 C DT 332 C
3 1.62 1.71 23.2 0.93 0.03 4.2 90 1 0 2 4 1 0 0  DT 322 B DA 323 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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