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PDBsum entry 4xom

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4xom calculated with MOLE 2.0 PDB id
4xom
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.55 1.57 28.7 -0.81 0.08 14.1 81 4 1 3 3 2 0 1  
2 1.69 1.69 41.3 -1.24 -0.41 20.3 92 5 1 1 4 0 0 0  SO4 501 C
3 1.79 1.92 63.3 -1.79 -0.30 27.1 86 11 1 2 3 0 1 0  SO4 501 B
4 1.68 2.69 66.3 -1.16 0.04 23.2 78 8 4 2 7 2 2 1  SO4 501 B
5 1.73 3.84 72.3 -1.03 -0.19 22.6 83 9 3 2 9 0 2 0  SO4 501 B
6 1.51 1.67 76.5 -1.51 -0.26 24.8 83 12 8 1 5 3 2 0  
7 1.67 2.23 84.0 -1.09 0.01 18.7 80 10 1 4 8 4 1 0  SO4 501 B
8 1.69 2.66 96.5 -1.52 -0.26 24.9 84 9 6 2 7 0 2 0  
9 1.38 1.60 97.2 -1.22 -0.33 17.0 79 4 5 3 5 3 2 0  
10 1.38 1.66 103.0 -1.22 -0.10 24.6 80 14 12 1 9 6 0 0  
11 1.52 1.69 122.2 -1.32 -0.30 22.8 84 15 9 3 11 3 3 0  SO4 501 B
12 1.19 1.71 127.4 -1.23 -0.28 21.6 84 13 8 4 13 3 3 0  SO4 501 B
13 1.47 1.68 153.5 -1.36 -0.32 25.0 83 13 15 2 10 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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