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PDBsum entry 4xkm

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 4xkm calculated with MOLE 2.0 PDB id
4xkm
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.31 2.40 27.2 -1.80 -0.41 24.3 78 5 2 1 2 1 0 0  
2 1.54 1.54 27.2 -1.57 -0.34 21.7 77 5 0 1 3 1 1 0  
3 1.40 1.40 29.0 -1.34 -0.50 17.0 81 5 4 2 2 2 0 0  
4 1.37 2.31 64.0 -1.60 -0.51 16.1 77 7 5 7 7 3 0 0  
5 1.24 2.56 86.4 -1.63 -0.49 18.4 79 9 6 6 6 4 0 2  
6 1.37 2.30 87.3 -1.56 -0.38 17.4 76 8 6 7 8 7 0 0  
7 1.43 2.21 93.0 -1.57 -0.41 17.3 77 9 7 8 8 7 0 0  
8 1.70 2.79 94.8 -1.79 -0.43 19.6 79 10 9 7 5 7 0 0  
9 1.20 1.35 105.0 -2.18 -0.37 21.2 78 13 12 12 10 6 0 0  
10 1.78 1.91 114.9 -1.89 -0.49 20.4 81 11 12 13 6 7 0 0  
11 1.17 1.40 127.5 -1.71 -0.36 20.9 81 10 7 7 6 5 0 0  
12 1.38 2.26 147.1 -1.82 -0.31 20.0 77 12 9 12 10 9 0 0  
13 1.51 2.21 172.3 -0.81 -0.49 13.3 83 5 4 4 6 2 0 0  
14 1.24 2.17 231.1 -1.82 -0.33 21.7 77 25 16 17 21 16 0 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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