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PDBsum entry 4xix

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4xix calculated with MOLE 2.0 PDB id
4xix
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.47 1.64 43.1 -0.98 -0.25 17.6 78 4 2 1 7 1 2 0  
2 1.23 2.30 51.0 -1.31 -0.58 18.9 83 2 5 2 3 1 1 0  
3 1.23 2.33 60.6 -1.03 -0.26 17.4 76 5 4 3 6 2 3 0  
4 1.74 1.94 81.8 -1.69 -0.47 23.5 81 7 4 3 6 0 3 0  2HP 403 B 2HP 405 H
5 1.45 1.60 100.0 -1.48 -0.33 22.3 77 10 5 4 9 1 5 0  2HP 403 B 2HP 405 H
6 1.72 1.90 102.4 -1.45 -0.42 17.6 85 7 4 7 9 0 4 0  
7 1.56 1.57 104.5 -1.13 -0.37 15.7 82 11 2 5 10 0 7 0  
8 2.85 2.91 104.8 -2.02 -0.54 22.4 84 10 4 7 6 0 3 0  2HP 403 B 2HP 405 H
9 2.59 3.15 31.9 -1.52 0.13 29.0 83 5 0 1 4 0 1 0  
10 2.58 3.09 40.6 -1.42 -0.05 20.3 81 5 0 4 3 0 2 0  
11 2.60 3.15 50.6 -1.90 -0.03 28.2 82 6 0 4 5 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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