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PDBsum entry 4xii
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Tunnel analysis for: 4xii calculated with  MOLE 2.0
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PDB id
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4xii
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.34 |
33.7 |
-0.63 |
-0.39 |
8.5 |
74 |
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3 |
2 |
4 |
3 |
2 |
0 |
3 |
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40V 1001 B EDO 1013 B
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2 |
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1.22 |
1.49 |
19.1 |
-1.94 |
-0.46 |
29.9 |
74 |
3 |
3 |
0 |
2 |
2 |
0 |
0 |
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3 |
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1.22 |
1.50 |
21.7 |
-1.78 |
-0.50 |
25.4 |
72 |
3 |
4 |
0 |
1 |
2 |
0 |
0 |
CL 1009 A EDO 1010 A
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4 |
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1.12 |
1.47 |
20.9 |
-1.26 |
0.01 |
19.9 |
74 |
3 |
2 |
1 |
3 |
2 |
1 |
0 |
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5 |
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1.34 |
2.78 |
16.5 |
-1.10 |
0.09 |
7.9 |
78 |
1 |
0 |
2 |
3 |
2 |
0 |
0 |
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6 |
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1.25 |
1.44 |
15.7 |
-0.86 |
0.09 |
6.8 |
78 |
1 |
0 |
2 |
3 |
2 |
0 |
0 |
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7 |
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1.32 |
1.57 |
16.4 |
-0.73 |
-0.08 |
13.9 |
74 |
2 |
1 |
1 |
2 |
2 |
1 |
0 |
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8 |
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1.31 |
1.57 |
18.3 |
-0.98 |
-0.09 |
17.4 |
76 |
3 |
2 |
1 |
2 |
2 |
1 |
0 |
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9 |
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1.52 |
3.48 |
15.1 |
0.39 |
-0.06 |
4.3 |
68 |
0 |
1 |
1 |
4 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program