PDBsum entry 4xg9

Pore analysis for: 4xg9 calculated with

MOLE 2.0

PDB id

4xg9

Pores calculated on whole structure

Pores calculated excluding ligands

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MOLEonline 2.0 manipulation
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visualization
with HETATM:

without HETATM:

4 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.36

1.70

39.3

0.03

0.02

14.6

80

6

2

1

7

2

1

0

X9G 700 A

2

1.72

1.93

41.1

-1.86

-0.61

17.1

75

3

2

3

2

1

1

0

X9G 700 A

3

1.39

1.57

79.3

-1.60

-0.31

20.9

79

6

5

4

6

4

1

0

4

1.39

1.57

82.9

-1.75

-0.46

19.2

81

7

4

5

5

2

1

0

X9G 700 A

5

1.31

1.60

28.8

-0.12

-0.04

13.5

83

4

2

2

7

1

1

0

X9G 700 B

6

1.58

2.69

31.5

-1.21

-0.13

13.3

80

2

1

1

3

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.