PDBsum entry 4xdd Go to PDB code:  Pore analysis for: 4xdd calculated with MOLE 2.0 PDB id 4xdd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.93 2.64 28.3 -2.07 -0.61 18.7 86 3 4 5 2 0 0 0   2 1.39 1.55 51.8 -1.57 -0.50 15.0 78 7 3 5 3 4 0 0   3 1.43 1.88 53.3 -1.63 -0.52 15.7 82 5 3 3 1 2 2 0   4 1.40 1.55 59.6 -1.81 -0.46 18.6 79 8 4 5 3 2 0 1   5 1.37 1.66 63.4 -2.37 -0.47 24.6 79 10 5 7 3 3 1 0   6 1.77 3.09 66.3 -1.50 -0.47 15.5 80 8 5 6 6 1 1 0   7 1.35 1.63 75.6 -2.09 -0.43 24.0 80 14 6 9 4 2 1 0   8 1.38 1.54 75.9 -1.81 -0.53 17.4 81 9 4 7 5 2 0 0   9 1.73 2.98 78.2 -1.49 -0.50 14.3 80 8 4 6 6 1 1 0   10 1.71 1.71 80.3 -1.18 -0.46 13.9 83 10 5 9 7 0 1 0   11 2.04 2.27 79.9 -1.25 -0.52 10.1 83 10 4 6 6 0 0 0   12 1.71 1.71 90.4 -1.49 -0.46 15.9 82 14 5 9 7 0 1 0   13 1.13 1.12 91.2 -2.03 -0.53 15.5 84 7 4 6 1 2 1 0   14 1.66 1.79 93.0 -1.81 -0.47 20.4 79 13 6 8 7 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.