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PDBsum entry 4xdc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4xdc calculated with MOLE 2.0 PDB id
4xdc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 1.60 28.0 1.44 0.36 6.1 69 2 0 0 6 0 1 4  SF4 604 B
2 1.37 1.46 22.3 -2.51 -0.59 25.3 86 4 4 3 1 0 0 1  
3 1.36 1.46 22.4 -2.52 -0.44 28.4 81 4 2 3 1 0 0 1  
4 1.55 2.15 15.0 -2.00 -0.66 23.2 77 3 1 1 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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