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PDBsum entry 4x6h

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Hydrolase PDB id
4x6h
Contents
Protein chain
215 a.a.
Ligands
3XT-I37
SO4 ×6
Waters ×290

References listed in PDB file
Key reference
Title Development of n-(Functionalized benzoyl)-Homocycloleucyl-Glycinonitriles as potent cathepsin k inhibitors.
Authors J.Borišek, M.Vizovišek, P.Sosnowski, B.Turk, D.Turk, B.Mohar, M.Novič.
Ref. J Med Chem, 2015, 58, 6928-6937. [DOI no: 10.1021/acs.jmedchem.5b00746]
PubMed id 26280490
Abstract
Cathepsin K is a major drug target for osteoporosis and related-bone disorders. Using a combination of virtual combinatorial chemistry, QSAR modeling, and molecular docking studies, a series of cathepsin K inhibitors based on N-(functionalized benzoyl)-homocycloleucyl-glycinonitrile scaffold was developed. In order to avoid previous problems of cathepsin K inhibitors associated with lysosomotropism of compounds with basic character that resulted in off-target effects, a weakly- to nonbasic moiety was incorporated into the P3 position. Compounds 5, 6, and 9 were highly selective for cathepsin K when compared with cathepsins L and S, with the Ki values in the 10-30 nM range. The kinetic studies revealed that the new compounds exhibited reversible tight binding to cathepsin K, while the X-ray structural studies showed covalent and noncovalent binding between the nitrile group and the catalytic cysteine (Cys25) site.
PROCHECK
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 Headers

 

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