PDBsum entry 4x6d Go to PDB code:  Tunnel analysis for: 4x6d calculated with MOLE 2.0 PDB id 4x6d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.44 45.2 0.12 0.09 15.2 74 5 2 2 9 2 2 0   2 1.23 1.43 17.6 0.61 0.37 5.1 63 1 0 1 4 2 2 0   3 1.23 1.43 19.6 0.37 0.45 8.1 64 2 1 1 3 4 0 0   4 1.23 1.42 22.5 0.68 0.32 2.2 72 1 0 4 4 2 2 0   5 1.24 1.42 29.8 0.41 0.17 3.5 65 0 2 3 4 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.