spacer
spacer

PDBsum entry 4x59

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4x59 calculated with MOLE 2.0 PDB id
4x59
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.46 16.0 0.58 0.09 5.9 68 1 0 1 3 2 0 0  
2 1.37 1.40 17.2 -0.07 -0.15 7.0 73 2 0 1 2 2 0 0  
3 1.25 1.46 17.4 0.43 0.23 4.7 71 2 0 1 4 3 0 0  GOL 409 B
4 1.16 1.27 22.1 1.40 0.58 6.2 72 1 0 1 6 3 0 0  GOL 409 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer