 |
PDBsum entry 4x4l
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4x4l calculated with MOLE 2.0
|
PDB id
|
|
|
|
4x4l
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
1 tunnel,
coloured by tunnel radius |
 |
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.62 |
4.06 |
29.8 |
0.77 |
0.36 |
7.3 |
77 |
 |
1 |
1 |
3 |
3 |
3 |
0 |
1 |
 |
3XG 603 A
|
 |
 |
2 |
 |
1.41 |
3.61 |
31.3 |
-0.80 |
-0.06 |
13.5 |
72 |
0 |
4 |
4 |
2 |
4 |
2 |
1 |
YB 602 A 3XG 603 A CL 605 A CL 606 A CL 607 A NAI 608 A
|
 |
3 |
 |
1.38 |
3.68 |
33.5 |
-1.02 |
-0.14 |
16.3 |
72 |
2 |
6 |
3 |
1 |
4 |
1 |
1 |
3XG 603 A NAI 608 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |