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PDBsum entry 4x2b
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Pore analysis for: 4x2b calculated with  MOLE 2.0
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PDB id
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4x2b
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.36 |
2.39 |
33.8 |
-2.55 |
-0.60 |
31.5 |
79 |
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6 |
3 |
0 |
1 |
0 |
1 |
0 |
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A 903 B U 904 B DG 916 C DG 917 C DC 918 C DC 919
C DC 920 C
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2 |
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1.76 |
1.76 |
38.8 |
-3.01 |
-0.68 |
37.5 |
77 |
6 |
5 |
0 |
0 |
0 |
1 |
0 |
U 904 B C 908 B C 909 B DG 915 C DG 916 C DG 917
C DC 918 C DC 919 C DC 920 C
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3 |
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2.20 |
2.20 |
40.3 |
-1.68 |
-0.80 |
20.6 |
90 |
1 |
2 |
0 |
1 |
0 |
0 |
0 |
A 903 B U 904 B C 908 B C 909 B DG 915 C DG 916 C
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4 |
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2.39 |
2.38 |
62.0 |
-2.42 |
-0.67 |
29.6 |
80 |
7 |
4 |
0 |
1 |
0 |
1 |
0 |
A 903 B U 904 B DG 915 C DG 916 C DG 917 C DC 918
C DC 919 C DC 920 C
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5 |
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2.38 |
2.40 |
77.8 |
-2.20 |
-0.44 |
29.5 |
80 |
10 |
6 |
1 |
1 |
2 |
1 |
0 |
A 903 B U 904 B DG 915 C DG 916 C DG 917 C DC 918
C DC 919 C DC 920 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program