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PDBsum entry 4x1d

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4x1d calculated with MOLE 2.0 PDB id
4x1d
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.80 4.02 32.7 -1.23 -0.44 12.5 79 4 4 3 2 1 1 1  
2 1.65 3.97 36.7 -2.13 -0.76 21.6 89 5 5 7 1 0 0 0  
3 1.72 1.86 60.4 -1.80 -0.40 21.2 82 4 3 4 4 2 0 0  
4 2.64 2.66 101.9 -1.64 -0.22 22.9 71 11 4 2 7 4 3 0  
5 1.48 1.65 109.8 -1.95 -0.54 24.1 87 12 11 7 6 2 0 0  GOL 703 A
6 1.47 1.67 111.7 -2.19 -0.49 22.9 87 10 11 10 6 1 1 1  
7 1.47 1.63 115.9 -2.23 -0.56 26.1 86 13 12 9 5 2 0 0  GOL 703 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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