PDBsum entry 4w5c

Pore analysis for: 4w5c calculated with

MOLE 2.0

PDB id

4w5c

Pores calculated on whole structure

Pores calculated excluding ligands

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8 pores, coloured by radius

8 pores, coloured by radius

8 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.72

2.85

27.6

-0.77

-0.40

11.4

73

1

2

1

2

2

2

0

2

2.03

2.17

30.3

-1.12

-0.36

9.2

78

2

1

4

1

2

1

1

3

2.98

4.09

41.7

-1.99

-0.37

22.9

85

6

5

4

4

2

1

1

4

2.96

4.09

52.2

-1.18

-0.54

13.0

86

3

3

3

3

0

2

1

5

1.72

1.72

52.7

-1.43

-0.31

13.9

85

5

5

9

5

4

1

0

6

3.49

4.41

60.2

-1.71

-0.44

17.3

89

5

6

6

6

2

1

0

7

1.71

1.71

62.2

-0.77

-0.42

5.6

88

2

2

8

4

2

1

0

8

1.78

1.82

80.5

-1.54

-0.42

17.8

86

6

8

5

6

2

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.