spacer
spacer

PDBsum entry 4ufc

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ufc calculated with MOLE 2.0 PDB id
4ufc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.64 16.2 -2.18 -0.02 19.1 74 1 4 2 0 3 0 0  GIV 1810 B
2 1.31 1.71 21.7 -2.50 0.02 30.2 73 3 3 2 0 3 0 0  GIV 1810 B
3 1.14 1.30 19.9 1.40 0.69 3.1 83 1 0 1 4 2 0 0  
4 1.17 2.61 20.8 0.82 0.67 5.8 82 2 0 1 4 2 0 0  
5 1.24 1.24 15.2 -2.17 -0.40 17.9 72 1 2 3 1 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer