PDBsum entry 4u3e Go to PDB code:  Pore analysis for: 4u3e calculated with MOLE 2.0 PDB id 4u3e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.44 34.3 -1.31 -0.56 13.6 79 2 4 3 2 2 0 0  MSE 1 A 2 1.22 1.37 64.1 -1.45 -0.43 12.8 87 4 3 7 3 4 0 1  MSE 356 B MSE 583 B CIT 902 B 3 1.39 1.55 69.0 -1.53 -0.50 17.8 85 5 9 7 4 4 0 1  MSE 356 A CIT 702 A NA 704 A ACT 705 A 4 1.53 4.16 69.9 -1.27 -0.45 21.1 84 5 6 5 3 0 1 0   5 1.48 1.62 87.2 -1.35 -0.43 12.8 89 6 4 12 4 4 2 1  MSE 356 A 6 1.69 2.12 88.9 -1.77 -0.43 22.6 86 12 6 7 4 3 2 0   7 1.19 1.41 99.6 -1.43 -0.47 18.6 84 6 6 6 3 3 1 0  MSE 1 A 8 1.97 2.45 110.2 -1.76 -0.54 20.5 87 12 7 10 4 1 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.