PDBsum entry 4u3e Go to PDB code:  Tunnel analysis for: 4u3e calculated with MOLE 2.0 PDB id 4u3e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.38 83.2 -1.14 -0.34 12.4 82 7 5 9 6 6 1 1  MSE 122 A MSE 356 A MSE 429 A CIT 702 A NA 704 A ACT 705 A 2 1.19 1.59 84.9 -1.05 -0.31 13.6 78 6 3 7 6 7 2 0  MSE 26 A MSE 29 A MSE 122 A MSE 429 A 3 1.24 1.37 87.0 -1.30 -0.29 17.8 80 9 4 6 5 7 1 0  MSE 122 A MSE 429 A 4 1.22 1.37 108.3 -1.00 -0.26 12.1 82 8 3 10 8 8 1 1  MSE 122 A MSE 429 A MSE 356 B MSE 580 B MSE 583 B CIT 902 B 5 1.30 2.45 30.8 -0.47 -0.11 12.7 81 3 2 3 5 1 1 0  MSE 531 B 6 1.15 1.27 19.5 1.80 0.52 1.9 72 1 0 0 5 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.